Alignment API and Server 4.1.${version.update}
A B C D E F G H I J K L M N O P Q R S T U V W X Y _

R

randomNum() - Method in class fr.inrialpes.exmo.align.service.CacheImpl
 
rawmap - Variable in class fr.inrialpes.exmo.align.impl.eval.AveragePRGraphEvaluator
 
RDFGraph - Interface in fr.inrialpes.exmo.queryprocessor
 
rDFModel - Static variable in class fr.inrialpes.exmo.align.parser.RDFParser
 
RDFParser - Class in fr.inrialpes.exmo.align.parser
Parser for the EDOAL syntax.
RDFParser() - Constructor for class fr.inrialpes.exmo.align.parser.RDFParser
Creates an RDF Parser.
RDFParser(int) - Constructor for class fr.inrialpes.exmo.align.parser.RDFParser
Creates an RDF Parser.
RDFRendererVisitor - Class in fr.inrialpes.exmo.align.impl.renderer
Renders an alignment in its RDF format
RDFRendererVisitor(PrintWriter) - Constructor for class fr.inrialpes.exmo.align.impl.renderer.RDFRendererVisitor
 
reachable(URI) - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
Utilities: reaching and loading ontologies
read(String) - Static method in class fr.inrialpes.exmo.align.impl.BasicParameters
 
read(BasicParameters, String) - Static method in class fr.inrialpes.exmo.align.impl.BasicParameters
 
readParameters(String[]) - Method in class fr.inrialpes.exmo.align.service.AlignmentService
 
reasoner - Variable in class fr.inrialpes.exmo.align.impl.IDDLOntologyNetwork
 
recall - Variable in class fr.inrialpes.exmo.align.impl.eval.PRecEvaluator
 
receiver - Variable in class fr.inrialpes.exmo.align.service.Message
 
reconnect() - Method in interface fr.inrialpes.exmo.align.service.DBService
 
reconnect() - Method in class fr.inrialpes.exmo.align.service.DBServiceImpl
 
recordAlignment(String, Alignment, boolean) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
records alignment identified by id
recordElement(String, SyntaxElement) - Static method in enum fr.inrialpes.exmo.align.parser.SyntaxElement
 
recordNewAlignment(Alignment, boolean) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
records newly created alignment
recordNewAlignment(String, Alignment, boolean) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
records alignment identified by id
recordOntology(URI, O) - Method in class fr.inrialpes.exmo.ontowrap.OntologyCache
 
recordVariable(String, Expression) - Method in class fr.inrialpes.exmo.align.impl.edoal.EDOALAlignment
 
recorientprec - Variable in class fr.inrialpes.exmo.align.impl.eval.ExtPREvaluator
 
recorientrec - Variable in class fr.inrialpes.exmo.align.impl.eval.ExtPREvaluator
 
reference - Variable in class fr.inrialpes.exmo.align.util.ExtGroupEval
 
reference - Variable in class fr.inrialpes.exmo.align.util.GroupEval
 
register - Static variable in enum fr.inrialpes.exmo.align.impl.Namespace
 
register - Static variable in enum fr.inrialpes.exmo.align.parser.SyntaxElement
 
register(Alignment) - Method in interface fr.inrialpes.exmo.align.service.Directory
Register an alignment to the directory (if necessary)
register(Alignment) - Method in class fr.inrialpes.exmo.align.service.OysterDirectory
Register an alignment to the directory (if necessary)
registerWithDF() - Method in class fr.inrialpes.exmo.align.service.jade.JadeFIPAAServiceAgent
 
relation - Variable in class fr.inrialpes.exmo.align.impl.BasicCell
 
relation - Variable in class fr.inrialpes.exmo.align.impl.BasicRelation
It is intended that the value of the relation is =, < or >.
relation - Variable in class fr.inrialpes.exmo.align.parser.XMLParser
the relation content as text...
Relation - Interface in org.semanticweb.owl.align
 
RelationCoDomainRestriction - Class in fr.inrialpes.exmo.align.impl.edoal
Represents a coDomainRestriction tag for RelationExpressions.
RelationCoDomainRestriction() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationCoDomainRestriction
Constructs a simple RelationCoDomainRestriction
RelationCoDomainRestriction(ClassExpression) - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationCoDomainRestriction
Constructs a RelationCoDomainRestriction with the given restriction.
RelationConstruction - Class in fr.inrialpes.exmo.align.impl.edoal
Represents a RelationExpression.
RelationConstruction() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationConstruction
 
RelationConstruction(SyntaxElement.Constructor, Collection<PathExpression>) - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationConstruction
 
RelationDomainRestriction - Class in fr.inrialpes.exmo.align.impl.edoal
Represents a domainRestriction tag for RelationExpressions.
RelationDomainRestriction() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationDomainRestriction
Constructs a simple RelationDomainRestiction
RelationDomainRestriction(ClassExpression) - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationDomainRestriction
Constructs a RelationDomainRestiction with the given restriction.
RelationExpression - Class in fr.inrialpes.exmo.align.impl.edoal
Represents a RelationExpression.
RelationExpression() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationExpression
 
RelationId - Class in fr.inrialpes.exmo.align.impl.edoal
A simple Id to represent a Relation.
RelationId() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationId
Creates an anonymous relation pattern
RelationId(String) - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationId
 
RelationId(URI) - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationId
 
RelationRestriction - Class in fr.inrialpes.exmo.align.impl.edoal
Superclass for all RelationConditions.
RelationRestriction() - Constructor for class fr.inrialpes.exmo.align.impl.edoal.RelationRestriction
 
relativePosition(Object, Object, HeavyLoadedOntology<Object>) - Method in class fr.inrialpes.exmo.align.impl.eval.ExtPREvaluator
Returns the relative position of two entities: 0: unrelated n: o1 is a n-step sub-entity of o2 -n: o2 is a n-step sub-entity of o1
remAlignment(Alignment) - Method in class fr.inrialpes.exmo.align.impl.BasicOntologyNetwork
 
remAlignment(Alignment) - Method in interface org.semanticweb.owl.align.OntologyNetwork
 
remCell(Cell) - Method in class fr.inrialpes.exmo.align.impl.BasicAlignment
 
remCell(Cell) - Method in interface org.semanticweb.owl.align.Alignment
 
remOntology(URI) - Method in class fr.inrialpes.exmo.align.impl.BasicOntologyNetwork
 
remOntology(URI) - Method in interface org.semanticweb.owl.align.OntologyNetwork
 
remove() - Method in class fr.inrialpes.exmo.align.impl.ConcatenatedIterator
 
remove() - Method in class fr.inrialpes.exmo.align.impl.MIterator
 
remove() - Method in class fr.inrialpes.exmo.ontowrap.owlapi10.OWLAPIAnnotIt
 
removeAlignCell(Cell) - Method in class fr.inrialpes.exmo.align.impl.BasicAlignment
 
removeHasParameter(Parameter) - Method in class fr.inrialpes.exmo.align.service.jade.messageontology.Action
 
renameColumn(Statement, String, String, String, String) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
 
render(AlignmentVisitor) - Method in class fr.inrialpes.exmo.align.impl.BasicAlignment
This should be rewritten in order to generate the axiom ontology instead of printing it! And then use ontology serialization for getting it printed.
render(Message) - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
 
render(AlignmentVisitor) - Method in interface org.semanticweb.owl.align.Alignment
Exporting The alignments are exported for other purposes.
RenderedAlignment - Class in fr.inrialpes.exmo.align.service
Contains the messages that should be sent according to the protocol
RenderedAlignment(int, Message, String, String, String, Properties) - Constructor for class fr.inrialpes.exmo.align.service.RenderedAlignment
 
rendererClass - Variable in class fr.inrialpes.exmo.align.util.GroupAlign
 
renderers - Variable in class fr.inrialpes.exmo.align.service.AServProtocolManager
 
renderVariables(Expression) - Method in class fr.inrialpes.exmo.align.impl.renderer.RDFRendererVisitor
 
replyto(Message) - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
 
replywith(Message) - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
Ideal network implementation protocol: - publication (to some directory) registerID publishServices unregisterID (publishRenderer) (publishMethods) : can be retrieved through the classical interface.
res - Variable in class fr.inrialpes.exmo.align.impl.edoal.TransfService
resource (uri) to the service
reset() - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
 
reset() - Method in class fr.inrialpes.exmo.align.service.CacheImpl
 
resetCacheStamp(Alignment) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
 
resetDatabase(boolean) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
 
resource - Variable in enum fr.inrialpes.exmo.align.parser.SyntaxElement
Holds the RDF Resource or property for the entity This is to be used by the RDF parser.
RESTString() - Method in class fr.inrialpes.exmo.align.service.AlignmentId
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.AlignmentIds
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.AlignmentMetadata
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.CannotRenderAlignment
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.ErrorMsg
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.EvalResult
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.EvaluationId
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.Message
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.NonConformParameters
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.OntologyURI
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.RenderedAlignment
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.RunTimeError
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.Success
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.TranslatedMessage
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.UnknownAlignment
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.UnknownMethod
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.UnreachableAlignment
 
RESTString() - Method in class fr.inrialpes.exmo.align.service.UnreachableOntology
 
result - Variable in class fr.inrialpes.exmo.align.impl.BasicEvaluator
 
result - Variable in class fr.inrialpes.exmo.align.service.AServProtocolManager.Aligner
 
result - Variable in class fr.inrialpes.exmo.align.service.jade.messageontology.Action
Protege name: Result
Result - Interface in fr.inrialpes.exmo.queryprocessor
 
RETRIEVE - Static variable in class fr.inrialpes.exmo.align.service.jade.messageontology.JADEFIPAAlignmentServerOntology
 
RETRIEVE - Class in fr.inrialpes.exmo.align.service.jade.messageontology
Protege name: RETRIEVE
RETRIEVE() - Constructor for class fr.inrialpes.exmo.align.service.jade.messageontology.RETRIEVE
 
retrieveAlignment(Message) - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager
returns null if alignment not retrieved Otherwise returns AlignmentId or an ErrorMsg
retrieveAlignment(String, Alignment) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
loads the full alignments from the database and put them in the alignmentTable hastable should be invoked when: ( result.getExtension(CACHED) == "" && result.getExtension(STORED) != "") {
retrieveDescription(String) - Method in class fr.inrialpes.exmo.align.service.CacheImpl
loads the description of alignments from the database and set them in an alignment object Beware, the Alignment API has two attributes: onto1 is the Ontology object uri1 is the URI object from which loading the ontologies In the database we store: ontology1 the URI string of the ontology file1 the URI string from which loading the ontologies uri1 which should be the same as the last one...
returnAlignment(String) - Method in class fr.inrialpes.exmo.align.service.HTMLAServProfile
Returns the alignment in RDF/XML
rewriteQuery(String) - Method in class fr.inrialpes.exmo.align.service.QueryMediator
 
rewriteSPARQLQuery(String, Alignment) - Static method in class fr.inrialpes.exmo.align.service.QueryMediator
 
rights - Variable in class fr.inrialpes.exmo.align.service.CacheImpl
 
ROCCurveEvaluator - Class in fr.inrialpes.exmo.align.impl.eval
Compute ROCCurves
ROCCurveEvaluator() - Constructor for class fr.inrialpes.exmo.align.impl.eval.ROCCurveEvaluator
 
run(String[]) - Method in class fr.inrialpes.exmo.align.service.AlignmentService
 
run() - Method in class fr.inrialpes.exmo.align.service.AServProtocolManager.Aligner
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.EvalAlign
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.ExtGroupEval
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.GenPlot
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.GroupAlign
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.GroupEval
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.GroupOutput
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.ParserPrinter
 
run(String[]) - Method in class fr.inrialpes.exmo.align.util.Procalign
 
RunTimeError - Class in fr.inrialpes.exmo.align.service
Contains the messages that should be sent according to the protocol
RunTimeError(int, Message, String, String, String, Properties) - Constructor for class fr.inrialpes.exmo.align.service.RunTimeError
 

Alignment API and Server 4.1.${version.update}
A B C D E F G H I J K L M N O P Q R S T U V W X Y _
(C) INRIA & friends, 2003-${curryear}